UCL methodology outperforms commercial solutions for protein-drug binding affinity calculations

Category Archives: News

UCL methodology outperforms commercial solutions for protein-drug binding affinity calculations

A joint UCL / Janssen team has performed a statistically robust head-to-head comparison between the Centre for Computational Science’s high performance computational method, TIES, and that offered by a commercial provider, Schrödinger Inc, FEP+, for calculating relative free energies of binding of candidate drugs to target proteins. TIES and FEP+ use different so-called “alchemical” free…

Call for Papers and Abstracts: The 17th Multiscale Modelling and Simulation Workshop, June 2020, Amsterdam. Deadline 15 January 2020

Call for Papers open for the 17th Multiscale Modelling and Simulation Workshop, to be held in conjunction with the International Conference on Computational Science (ICCS) 3-5 June 2020 in Amsterdam, The Netherlands. Full paper submission and abstract submission is open at: https://easychair.org/conferences/?conf=iccs20200 The submission deadline is 15 January 2020.

CALL FOR PAPERS: UNCERTAINTY QUANTIFICATION FOR COMPUTATIONAL MODELS

CALL FOR PAPERS: UNCERTAINTY QUANTIFICATION FOR COMPUTATIONAL MODELS https://unequivocal.computationalscience.nl/ The UNEQUIvOCAL thematic track takes place during the International Conference on Computational Science ICCS 2020 in Amsterdam, The Netherlands, June 3 – June 5, 2020. Given that uncertainty is unavoidable in almost all scientific fields, due to e.g. unknown parameters or simplifying modelling assumptions, uncertainty quantification is an…

3-year UCL-Hexcel Studentship in Multiscale Modelling and Simulation of Graphene and Graphene-Oxide Polymer Composites

Supervisor: Professor P V Coveney, UCL Start date: January 2020. UCL in collaboration with Hexcel (http://www.hexcel.com) are offering a studentship to a highly motivated candidate to start in January 2019. The studentship will cover tuition fees at UK/EU rate, a £13,300 pa tax-free stipend and a £2,000 pa support grant to cover additional costs such…

Month 15 release of VECMA VVUQ Toolkit

We are very pleased to announce the Month 15 release of VECMA VVUQ Toolkit (VECMAtk). The software development of the VECMAtk is the central task for the VECMA project. The VECMAtk establishes a platform for verification, validation and uncertainty quantification (VVUQ). The goal is to provide tools for end users to capture complex scenarios, applied…

VECMA consortium group picture

In our first All Hands Meeting (AHM), which was hosted by the University of Amsterdam on the 9th and 10th of May 2019, Amsterdam, participated by all partners and associated partners plus a number of external guest and experts in HPC fields with a very happy gathering, see our VECMA group picture »

Research Fellowship (Software Engineer) for Molecular Simulation

Applications are invited for a Research Fellow/Software Engineer to work with Professor Peter Coveney in the Department of Chemistry at University College London. The successful candidate will join a very active cross-disciplinary group in the Centre for Computational Science. A PhD degree in bio-molecular dynamics modelling for protein-ligand alchemical binding free energy determination is a…